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Name: Nicholas J. Matzke
Type: User
Company: The Australian National University
Bio: For my work and CV, please see: http://phylo.wikidot.com/nicholas-j-matzke
Location: Canberra, Australia
Name: Nicholas J. Matzke
Type: User
Company: The Australian National University
Bio: For my work and CV, please see: http://phylo.wikidot.com/nicholas-j-matzke
Location: Canberra, Australia
Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n for
Supplementary data and code for Ashman et al. study of Australian Gehyra
R code for writing Beast2 XML (especially morphology/tip-dating)
Phylogenetic biogeography workshop files
BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
Bioinformatics hints in R
Nick Matzke's git mirror of the Biopython CVS repository, for GSoC 2009 project: BioGeography module for biopython
cladoRcpp: C++ implementations of phylogenetic cladogenesis calculations
Masafumi CPs project
Rediscovering the anti-racist legacies of Darwin, Huxley, and other great evolutionists.
ENMTools R Package
Supplemental Data for Klaus & Matzke paper on trait-dependent dispersal
Supplemental Files for Matzke (2021), rebutting Ree & Sanmartin (2018)
Supplemental Data for Matzke & Irmis (2018), "Including autapomorphies is important for paleontological tip-dating with clocklike data, but not with non-clock data." PeerJ 6:e4553. https://doi.org/10.7717/peerj.4553 Permanent Zenodo archive of Supplemental Data: https://zenodo.org/badge/latestdoi/128717052
Archiving CRAN binaries of R packages (as CRAN does not)
Replicating the "baraminic distance correlation" calculations that creationists use on cladistic morphology datasets. Should be entertaining.
This package contains data files for use in the examples in the "modiscloud" package. The files are MODIS Level 2 Cloud Product files, downloaded from the NASA MODIS archive, or TIFs derived from them.
Package for processing downloaded MODIS Cloud Product HDF files and derived files. Specifically, MOD35_L2 cloud product files, and the associated MOD03 geolocation files (for MODIS-TERRA); and MYD35_L2 cloud product files, and the associated MYD03 geolocation files (for MODIS-AQUA). The package will be most effective if the user installs MRTSwath (MODIS Reprojection Tool for swath products; https://lpdaac.usgs.gov/tools/modis_reprojection_tool_swath), and adds the directory with the MRTSwath executable to the default R PATH by editing ~/.Rprofile.
Nifty Jeneric Methods for R by Nicholas Joseph Matzke (practicing GitHub)
Dr. Nicholas J. Matzke: Integrating Ecological and Historical Biogeography with Statistical Phylogenetics
Supplementary Material for Lam, Stigall, and Matzke (2017), "Dispersal in the Ordovician"
Phylogenetic biogeography SSE models for large state spaces
Phylogenetic tree tables and other phylogenetic utilities. (Functions include: prt(tr) and other utilities. Also includes the PhyloNetworks tree object/reader/writer, with minimal dependencies.)
Phylogenetic Environmental Niche Modeling
Practicing registering C routine etc. for R packages
Writing reviews of academic papers
rexpokit: R Wrappers for EXPOKIT; Other Matrix Functions
Collection of tree files with parsing problems in various programs; for tests, debugging. Feel free to join/contribute!
A declarative, efficient, and flexible JavaScript library for building user interfaces.
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TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
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Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.