nipype / pydra-nipype1 Goto Github PK

@dPys and @anibalsolon have worked on this: https://github.com/dPys/nipype1topydratask/blob/master/converter.py

When working with an interface which requires a list as input (e.g the image_files input for spm.Dartel()), Nipype1Task will pass individual items of the list to the input instead of the entire list which causes the code to crash.

A workaround is to provide a list of list as input but I was wondering if this could be handled directly in the Nipye1Task _run_task code. The issue arises on l.72:

node.inputs.trait_set(**inputs)

If you use a Nipype 1 interface that requires copyfiles, Nipype1Task doesn't do this as Node used to. I think the solution is just to change self._interface.run() to Node(self._interface).run().