ning-liang Goto Github PK
Name: Ning Liang
Type: User
Name: Ning Liang
Type: User
Publication Page for Satpathy*, Granja* et al 2019
Repo for counting stars and contributing. Press F to pay respect to glorious developers.
ENCODE ATAC-seq pipeline
ATAC-seq processing pipeline
ATAC-seq peak-calling, QC and differential analysis pipeline.
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
A toolkit for QC and visualization of ATAC-seq results.
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
tools and notes for spatial omics
A curated list of resources for learning bioinformatics.
Homepage for STAT 157 at UC Berkeley
ATAC-seq lab for BIOINF525
Python short course for graduates in biology and biochemistry
Collection of Programming, Databases, Linux & Tools Books
RStudio Cheat Sheets
ChIP-seq analysis notes from Ming Tang
Analyzing chromatin accessibility data in R
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
Package corrplot is for visualizing a correlation matrix
Differential ATAC-seq toolkit
Recently updated with 50 new notebooks! Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.
A book covering the fundamentals of data visualization.
DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing
Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"
Single RNA-seq data analysis with R (Finland, May, 2019)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.