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jenkspy-feedstock

A conda-smithy repository for jenkspy.

krakentools

KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

maaslin2

MaAsLin2: Microbiome Multivariate Association with Linear Models

mbac

Tools for deep analysis of bacteria motility

meltsy

Mixed Effects Linear modelling for Time Series with Shiny

memacs

my emacs config. clone this to your home dir, and rename it ".emacs.d"

metaerg

fork for fixing issue #12 and #36

metaphlan

MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

microclass

R package for microbial taxonomic classification

midi2cv

Arduino-based MIDI to CV converter

mkdocs

Project documentation with Markdown.

mkdocs-sample

A sample documentation site generated from Markdown.

myblocks

or "Adventures in Littlefoot"

myrecipes

to help me keep track of and locally manage my conda and bioconda contributions

nar_riboseed

manuscript stuff

nrw_presentations

Moved from the FB repo

oasis

Optimized Annotation System for Insertion Sequences

open_utils

phanta

plentyofbugs

Find your sequenced isolate an compatable reference genome based on location, interests, and average nucleotide identity

prokka

:zap: :aquarius: Rapid prokaryotic genome annotation

prophet

ptformat

Free software file format parser for Avid ProTools sessions

pyani

Python module for average nucleotide identity analyses

pyutilsnrw

pyutilsnrw-feedstock

A conda-smithy repository for pyutilsnrw.

ragout

Chromosome assembly using multiple references

readabilityinscience

rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

riboseed

pipeline for using ribosomal flanking regions to improve bacterial genome assembly