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Name: Nick Waters
Type: User
Bio: Trying to figure those "bacteria" things that people keep talking about
Name: Nick Waters
Type: User
Bio: Trying to figure those "bacteria" things that people keep talking about
Sample Website for Instructor Training
An Automated Phylogenomic Inference Pipeline for Bacterial and Archaeal Sequences.
AnADAMA2 is the next generation of AnADAMA (Another Automated Data Analysis Management Application). AnADAMA is a tool to capture your workflow and execute it efficiently on your local machine or in a grid compute environment (ie. sun grid engine or slurm).
Filter Prokka assemblies for pangenome analysis
Large-scale Benchmarking of Microbial Multivariable Association Methods
Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets
:package: A high-level R interface for the box.com API
Hands-free microbial genome assembly
:flags: :ocean: CAFE is a genomic island Prediction tool
Minimal way to find and download complete prokaryotic genomes
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Count Regression for Correlated Observations with the Beta-binomial
Predicting microbial growth in a mixed culture from growth curve data
Accurate sample inference from amplicon data with single nucleotide resolution
all methods related to Enterobase
Phylotype your strains using Clermont's 2013 method: ezclermont.org
:gem: Genome mining tool-- Identifies regions of atypicality
Dear Future Me; this is to help get your system back to normal after Current You does something foolish.
Horizontally Aquired Partial Pangenome of Inserted Elements
hecatomb is a virome analysis pipeline for analysis of Illumina sequence data
NUIG Hacky Hour Plate Reader Example
HUMAnN 3.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).
🤖 isabl Command Line Client and SDK.
A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome
download isfinder database
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.