Comments (2)
New release is done!
from methylseq.
I'll close this one - feel free to merge the PR in :-)
from methylseq.
Related Issues (20)
- Support for NuGEN Ovation RRBS HOT 2
- samplesheet input is not detecting entire values in sample column HOT 6
- Create metro map HOT 1
- Add gemBS option
- CG CHG and CHH with --comprehensive flag using bismark workflow HOT 8
- --rrbs and --emseq parameter and argument usage
- typo in samplesheet in README.md?
- Latest template merge completely broke dev branch (on AWS + Fusion) HOT 4
- Specify additional "genomes" of spike-in controls for downstream calculation of bisulfite conversion efficiency HOT 1
- Schematic for the methylseq pipeline HOT 5
- bwameth pipeline skipping all bwameth steps when --fasta, --fasta_index, and --bwa_meth_index are provided. HOT 4
- AS-XS tag missing
- Write tests for samplesheet sample merging/grouping
- Adding --maxVariantFrac and --minOppositeDepth to MethylDackel (Bwameth option)
- Bwameth vs bismark HOT 1
- Multiple issues in the pipeline HOT 2
- samplesheet handling: different path + same filename gives an error
- Pipeline requires 72GB of RAM, even to test. HOT 2
- Preseq error HOT 4
- Massive disk usage HOT 2
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from methylseq.