Comments (1)
Hi, the pipeline does not support conda I am afraid. Please try running with a container engine like docker or singularity.
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Related Issues (20)
- Preseq doesn't finish correctly when scratch is set HOT 10
- Gene Annotation in IGV Session HOT 1
- Unclear how to continue once the workflow has run. HOT 2
- Samtools Customview Fails with Unavoidable Segmentation Faults HOT 4
- Incorporate spike-in normalisation for macs2 peakcalling HOT 2
- A question about the +4 and -5 shifts HOT 2
- scale factor HOT 2
- Update genome blacklists to actual CUT&RUN data
- Version 3.2 does not run, fails in frag histogram step HOT 10
- close issue
- Restricting or sorting deeptools plotprofile and heatmap by genes/gene expression HOT 1
- Improve error handling after error in PREPARE_GENOME:BLACKLIST_BEDTOOLS_INTERSECT
- Errors with deeptools computeMatrix HOT 1
- ERROR ~ ERROR: Please check input samplesheet HOT 2
- Error executing process CUTANDRUN:CUSTOM_DUMPSOFTWAREVERSIONS HOT 1
- Missing GTF path in genome config for UCSC yeast assembly `sacCer3` HOT 1
- don't want to skip FRiP score calculation HOT 1
- Align spike-in with less stringent params based on the left over from primary alignment
- Update MACS to v3 HOT 1
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