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nictru avatar nictru commented on August 19, 2024

Hey,
you are missing the phenotype parameter. I know this is not marked required in the documentation and a fix is already on the way. For now you should just provide a dummy table to make it work

Also you should probably update the pipeline, your version is 3 weeks old.

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ZabalaAitor avatar ZabalaAitor commented on August 19, 2024

Hey,
Thank you very much for your quick response. A newbie question: how can I update the pipeline?

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nictru avatar nictru commented on August 19, 2024

This should do it (docs):
nextflow pull nf-core/circrna

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ZabalaAitor avatar ZabalaAitor commented on August 19, 2024

Thank you so much!

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nictru avatar nictru commented on August 19, 2024

No problem! Feel free to close the issues once you have a working run :)

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