Coder Social home page Coder Social logo

Comments (3)

drpatelh avatar drpatelh commented on May 31, 2024

Maybe it's worth following this up with the authors of deepTools to make sure that there is an upper limit in terms of the number of samples. Would be better if an appropriate error message was generated before the rest of the script is executed.

It's not that informative having this many samples plotted for this kind of assessment. Ideally, we would plot all the IPs from the same experimental group along with their corresponding inputs.

from chipseq.

ewels avatar ewels commented on May 31, 2024

Looks like this has been fixed in deepTools pretty recently: deeptools/deepTools@be9eda6

If we update the pipeline to v3.2.0 of deepTools then the error should be resolved.

Phil

from chipseq.

ewels avatar ewels commented on May 31, 2024

Addressed in #71

from chipseq.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.