Related Issues (20)
- Clone tables after `define clone` process only contain `IGH` - `TRB` clones
- Revert workaround for Slurm Sbatch file too large when possible HOT 1
- Add remaining R scripts to EnchantR
- Define clones with dowser HOT 1
- Make sure all immcantation references are cited (esp. new tools) HOT 1
- Test data
- Identify / remove spaces in fields in the metadata table HOT 1
- samplesheet check make character
- Report findthreshold should report chosen threshold
- IMGT/GENE-DB downloads failing HOT 2
- test data failing HOT 3
- Analyzing BCR Rep-Seq Data in nf-core/airrflow Without Primer Information HOT 2
- Missing output file(s) `*_R1_primers-pass.fastq` HOT 3
- Invalid nextflow_schema.json using list type.
- Diversity reports HOT 1
- Add regions translations to final repertoire table
- Fetch other databases than IMGT: AIRR reference set
- Isotype and c_call columns HOT 3
- URGENT: pin nf-validation version HOT 2
- AIRRflow error/fails at Dowser step HOT 3
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from airrflow.