nextrnatx Goto Github PK
Name: NextRNA Therapeutics
Type: Organization
Blog: nextrnatx.com
NextRNA Therapeutics's Projects
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
clipseq
CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.
febrna
FebRNA: an automated fragment-ensemble-based model for building RNA 3D structures.
leafcutter
Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
nf-training-advanced
Customer workshop materials
package-r-nextrnacolors
Limited package to enable easy plotting of data using ggplot2 and NextRNA corporate colors
rnalight
a machine learning model to identify nucleotide features determining RNA subcellular localization
wf-nf-clipseq_single_end
CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.
wf-nf-hello
Classic hello world script in Nextflow language
wf-nf-rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
wf-nf-smrnaseq
A small-RNA sequencing analysis pipeline
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