Question about -debug output about nextpolish

[moold]

Hi, the following is its format:
seq_ID position(0-based) index new_base original_base

such as:
original_seq:
    >test
    ATGCA
new_seq:
    >test_np1
    ATGGCA
output:
    test_np1 2 1 G -

However, keep in mind that the position is the current input reference, so when you run NextPolish multiple iterations. -debug make no sense, because you can not trace the changes between the final result and the original reference.