Comments (8)
Abstract
Connectome maps brain network’s elements and connections to create a comprehensive architectural description of the network architecture. M2G pipeline is designed to estimate connectomes using several functional and diffusion studies, which preserves biological variability and reliability. This paper provides a comprehensive dataset of connectome outcomes generating from all available dMRI databases using M2G. The data provide materials and a test bed for neuroscience research.
from m2g.
Sprint 1 goals:
- Run and store all current and new dMRI datasets on AWS
- Write formal full outline for paper
from m2g.
Hi @XueminZhu-Charmaine , can you list what datasets you are planning on running?
from m2g.
Hi @XueminZhu-Charmaine , can you list what datasets you are planning on running?
We're still finding the datasets.
from m2g.
1.Correct labelings of Neuroparc atlas with Fang Cai, Zhen Hu, Jialin Kang, and Wilson Tang.
Neuroparc Correction Excel Sheets: https://drive.google.com/drive/folders/1m_cxxYcHkEkJoqg4-c2wmW8FUN52Wuti?usp=sharing
from m2g.
2.Writing analysis code and do batch analysis on M2G results with Zhen Hu, Fang Cai, Wilson Tang, and Eric.
Here is the DoD:
https://github.com/NeuroDataDesign/M2G_analysis
from m2g.
- Processed and uploaded datasets on S3 with Fang Cai, Zhen Hu, and Jialin Kang
Here is the DoD:
https://docs.google.com/spreadsheets/d/1Vr4uL6LZ2qtYdMztYYvf7dRJCvf14NG9x7rERJGPGaI/edit?usp=drive_web&ouid=109524036410778138686
from m2g.
4.Everyone: Data Descriptor Paper Draft.
Here is the link:
https://www.overleaf.com/7229861125bncdyxrwxkkb
from m2g.
Related Issues (20)
- missing QA of skull-strip (intermediate output within Registration Step) HOT 1
- Get QA intermediate registration work again HOT 1
- QA on Tensor Estimation HOT 1
- pure python for fast HOT 2
- @wilttang is ready
- Remove ActStoppingCriteron
- Issue with CSD Model
- Write a data descriptor paper, correct neuroparc atlas labels, create analysis code for analyzing m2g results. Datasets used: https://docs.google.com/spreadsheets/d/1Vr4uL6LZ2qtYdMztYYvf7dRJCvf14NG9x7rERJGPGaI/edit?usp=drive_web&ouid=109524036410778138686 HOT 5
- Writing a paper HOT 3
- Write a Data Descriptors Paper HOT 3
- writing a paper about our connectomes dataset HOT 5
- Write a paper of data description HOT 4
- Make m2g_bids and dwi_pipeline arguments agree with each other?
- Flesh-out parcellation finding
- Harvard Oxford Label Correspondence HOT 1
- Enhancements
- Possible steps to add to DTI pipeline HOT 2
- Migrate travis test to new domain HOT 1
- TODO for version v1.0.0
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from m2g.