naturalis Goto Github PK
Name: Naturalis Biodiversity Center
Type: Organization
Location: Leiden, the Netherlands
Blog: https://www.naturalis.nl
Naturalis Biodiversity Center's Projects
galaxy-tool-umi-isolation
galaxy-tool-visual-reporter
Use Phyloseq to a statistical analysis resulting in multiple plots.
galaxy-tool-vsearch-pipeline
galaxy-tool-worms
geneious-plugin
Geneious plugin developed by Naturalis Biodiversity Center
geogenodist
Data and scripts for the study of global trends in genetic distance by geographic distance.
hemiphot
Analysis of hemispherical images
high-mem-config
Configuration and provisioning files for the high mem HPC environment
hts-barcode-checker
Pipeline for BLAST analysis of high-throughput DNA sequencing data.
img-classify-all
Aggregator repository for projects related to image classification
imgpheno
Image feature extraction in Python
ioga
Iterative Organellar Genome Assembly
irods-b2safe-vagrant
A Vagrant "box" config with iRODS 4.x, B2SAFE, on a CentOS 6.5 64bit VirtualBox VM
irods-provisioner
irods_avu_json-docker
kiore-project
Genomic signatures of the Polynesian rat retrace the Austronesian expansion
lab-rdm-in-github
Research data management in GitHub
lod-hack
Experiments and documentation for the Linked Open Data mini-Hackathon 25-26 April 2016
mapdamage
mapDamage: testing for damage patterns in ancient DNA sequences
markdown2scorm
Convert markdown documentation to SCORM
mebioda
Course repository for Methods in Biodiversity Analysis
minion-pipeline-tooling
Tools for managing and automating analysis of MinION nanopore longreads
mixed-reads-assembly-erycina
Config files and scripts for assembly of mixed short (Illumina) and long (PacBio) reads
molecularbiodiversity
monophylizer
A web tool to assess monophyly in trees as produced by BOLD systems
mtdna-adna-assembly
Assembly of fragmented mitogenomes from ancient DNA
mtdna-reference-database
Reference database of panels of genomes for population-level aDNA identification
mycodiversity
Pipelines for analyzing fungal diversity
mycorrhiza
Evolutionary dynamics of mycorrhizal symbiosis in land plant diversification - trait data and analysis
naturalis-galaxy-tutorials
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