nathanskene Goto Github PK

als_human_ewce

als_mouse_ewce

amazon-fresh-whole-foods-delivery-slot-finder

A tool that finds available delivery slots for Amazon's Whole Foods delivery and Amazon Fresh services

cite_all_my_papers

ctd.human.midbrain.embryonic

Package of single cell RNA-seq data from human midbrain embryonic

datadive_scrnaseq_mapping

Imperial Medical Data Dive 2019: code for preparing multiple brain single cell RNA-seq for mapping against each other

datadrivencv

R package for building customizable CVs from spreadsheets

dendriticenrichmentpackage

Quality metric for single cell/nuclei datasets. Tests for differences in specificity of neuronal transcripts. Better datasets have more specific neuronal expression.

dockstore-tool-bamstats

A repo for the BAMStats command, used as the tutorial for Dockstore

doubletfinder

R package for detecting doublets in single-cell RNA sequencing data

ewce

Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.

gfxcardstatus

gfxCardStatus is an open-source menu bar application that keeps track of which graphics card your unibody, dual-GPU MacBook Pro is using at any given time, and allows you to switch between them on demand.

insiturnaseq_probeselection

liger

R package for integrating and analyzing multiple single-cell datasets

loomreader

Hacky way of reading Loom files into R

microglialdepletion

mungesumstats

Generic function for converting GWAS summary statistics to standardised LDSC/MAGMA input format

my-first-binder

nathanskene.github.io

Git Pages Website for Nathan Skene

nathanskenenetlift.github.io

one2one

This package is used to get 1:1 orthologs based on MGI homology data from http://www.informatics.jax.org/homology.shtml

patchseqmap

Map data from patchseq onto cell types

pd.ewce

pkgdown

Generate static html documentation for an R package

prommt

rgtsvm

The R package for SVM with GPU architecture based on the GTSVM software

sdbdbf

snplocdata

synaptomemapping-ageing

Bayesian analysis of synaptome mapping data, sharing information across regions

synaptomemapping-knockouts

Bayesian analysis of synaptome mapping data, sharing information across regions