Comments (2)
Hi again @wdecoster,
I cannot reproduce this with the v0.7.1 release. I think this is again something we fixed before you spotted it. There was an issue with some meta data recorded in some of the model files. I have added a test for the specific property that has failed above so we should catch it testing in future when new models appear.
from medaka.
Okay, that's great! Thanks for letting me know.
from medaka.
Related Issues (20)
- How trustworthy is the quality score output of medaka smolecule using the --quality flag? HOT 1
- choosinge the correct medaka model HOT 1
- Please push new releases to Conda HOT 2
- illegal hardware instruction HOT 14
- Trying to install medaka on macOS with pip. HOT 2
- Failed to run medaka consensus HOT 3
- Error/warning message when running v1.9.0 docker HOT 1
- The medaka was installed successfully. But when I typed "conda activate medaka''. It indicates that: EnvironmentNameNotFound: Could not find conda environment: medaka. How to fix this? HOT 1
- how to add Base Quality (BQ) tags to vcf output in medaka_haploid_variant HOT 5
- How does medaka handle duplex reads/quality scores? HOT 1
- medaka_consensus outputs .fasta with option -q HOT 2
- tools resolve_model requires chardet HOT 1
- Sum of SR is higher than DP for medaka_haploid_variant output file HOT 3
- Medaka_consensus: Could not retrieve index file for 'calls_to_draft.bam' HOT 2
- samtools deps missing when installing with conda
- small edit required in warning message about multithreading
- Medaka variant tools not producing DP and AD fields in VCF FORMAT output HOT 1
- Should the sum of SR be equal to DP? HOT 1
- Could not load symbol cublasGetSmCountTarget from libcublas.so.11. HOT 3
- Failed to stitch consensus chunks. (KeyError: b'contig_1') HOT 3
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from medaka.