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mwouts avatar mwouts commented on June 5, 2024

Hello @Siniara , thanks for reaching out!

Do I understand correctly that you want to sync your notebooks from the notebooks/ folder, to scripts in scripts/notebooks/?

I would expect that you could create a jupytext.toml configuration file with this content:

[formats]
"notebooks/" = "ipynb"
"scripts/notebooks/" = "py:percent"

and then simply run jupytext --sync notebooks/*.

It seems that when running commands from the command line configuration files are ignored

I don't expect that. What OS are you using? What is the outcome of find_jupytext_configuration_file (see https://jupytext.readthedocs.io/en/latest/config.html) ?

from jupytext.

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