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mridulkthomas's Projects

cleaning-and-clustering-sfcm-data icon cleaning-and-clustering-sfcm-data

This is code associated with the submitted manuscript "Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering".

covid-rt-estimates icon covid-rt-estimates

National and subnational estimates of the time-varying reproduction number for Covid-19

gleaner-exploiter-tradeoff-fast-slow-continuum icon gleaner-exploiter-tradeoff-fast-slow-continuum

These scripts reproduce all analyses in the paper "Heterotrophic eukaryotes show a fast-slow continuum, not a gleaner-exploiter trade-off". Data files needed as inputs for these scripts can be found at: https://doi.org/10.5281/zenodo.4002028

growthtools icon growthtools

Tool kit for estimating microbial growth rates and traits

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