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Manuel Razo-Mejia's Projects

autoencode.jl icon autoencode.jl

Julia package with several functions to train and analyze Autoencoder-based neural networks

barbay.jl icon barbay.jl

Repository for the BarBay Julia package for Bayesian inference of relative fitness on barcode sequencing data.

bayesfitness.jl icon bayesfitness.jl

BayesFitness.jl Julia package to infer fitness values from pooled competition experiments.

bayesian_fitness icon bayesian_fitness

Files related to the Bayesian inference of fitness values from barcode data

evo_mwc icon evo_mwc

Code base for experiments related to the connection between the MWC model and the evolution of gene regulation.

info_fitness icon info_fitness

A repository for the code and data for the information and fitness project

pboc icon pboc

Repository containing my answer to computational exercises from the Physical Biology of the Cell book.

phd icon phd

The repository containing everything related to my PhD thesis

proteinvae icon proteinvae

Repository containing the code for protein design based on Variational AutoEncoders

stat_gen icon stat_gen

This repository contains code I've generated while teaching myself population genetics.

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