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awesome-go

A curated list of awesome Go frameworks, libraries and software

biopython

Official git repository for Biopython (originally converted from CVS)

checkm

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

chic

Arima Capture HiC pipeline (Arima-CHiC)

datasciencecoursera

Repository for the evaluation

datasharing

The Leek group guide to data sharing

docker

earlgrey

Earl Grey: A fully automated TE curation and annotation pipeline

eihic

Bioinformatic pipeline to do QC oh Hi-C reads and manual curation with the contact matrices.

go-patterns

Curated list of Go design patterns, recipes and idioms

go_code_learning

inital steps to learn go. Here is where my path starts.

kit

A standard library for microservices.

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

metagenome_analysis

SnakeMake Pipeline to retrive MAGs from Illumina pair-end metagenomic sequencing data

predector

Effector prediction pipeline based on protein properties.

prodigal

Prodigal Gene Prediction Software

project-layout

Standard Go Project Layout

prokka

:zap: :aquarius: Rapid prokaryotic genome annotation

reat

Robust Eukaryotic Annotation Toolkit

snakemake-executor-plugin-slurm

A Snakemake executor plugin for submitting jobs to a SLURM cluster

transformers-tutorials

This repository contains demos I made with the Transformers library by HuggingFace.

vgp-assembly

VGP repository for the genome assembly working group