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Morgan Langille's Projects

biom-format icon biom-format

The Biological Observation Matrix (BIOM) Format Project

biotorrents icon biotorrents

A BitTorrent tracker for legal open sharing of scientific data

get_mgrast_data icon get_mgrast_data

Scripts that allow easy retrieval of information from the MG-RAST API

imr icon imr

Integrated Microbiome Resource

metamos icon metamos

A metagenomic assembly pipeline for AMOS

microbedb icon microbedb

Provides a local database of in-house and published genomes for Bacteria and Archaea from NCBI

minimal-mistakes icon minimal-mistakes

A responsive Jekyll theme with large full page images and clean typography.

phylosift icon phylosift

Phylogenetic and taxonomic analysis for genomes and metagenomes

picrust icon picrust

Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tests

qiime icon qiime

Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

shiny-phyloseq icon shiny-phyloseq

An interactive web application for demonstrating and using phyloseq.

stamp icon stamp

Statistical Analysis of Metagenomic Profiles

vermillion icon vermillion

A bioinformatics package for the processing of targeted DNA sequencing to discover novel endogenous retroviruses.

virfinder icon virfinder

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

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