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assemblosis

CWL-based automated bioinformatics workflow for PacBio and Illumina data

cellect

CELLECT (CELL-type Expression-specific integration for Complex Traits)

cellphonedb

cellphonedb.plots

CellPhoneDB figure plots

coder2gwy

互联网首份程序员考公指南，由3位已经进入体制内的前大厂程序员联合献上。

common-workflow-language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

dynmethods

A collection of 50+ trajectory inference methods within a common interface 📥📤

excelerate-scrnaseq

Single RNA-seq data analysis with R (Finland, May, 2019)

fgsea

Fast Gene Set Enrichment Analysis

ggpointdensity

:chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

gwa_tutorial

A comprehensive tutorial about GWAS and PRS

monocle-release

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

scenicprotocol

A scalable SCENIC workflow for single-cell gene regulatory network analysis

scp

SCP provides a comprehensive set of tools for single cell data processing and downstream analysis.

scrna_smart_seq2

scrnatoolvis

Useful functions to make your scRNA-seq plot more cool!

single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

singlecell

Code repository for single cell RNA-seq

singlecellcd8ibd

startrac

STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)

velodyn

Dynamical systems methods for RNA velocity analysis