Name: Milad Bastami
Type: User
Company: Garvan Institute of Medical Research
Bio: Apply Computational Biology and Bioinformatics approaches to large-scale genomics data
Location: Australia
Blog: https://scholar.google.com/citations?user=qzfFHyUAAAAJ&hl=en
abc-enhancer-gene-prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
book
clomat
CLoMAT: Conditional Logistic Model Association Tests. CLoMAT provides a general solution to control for population stratification by matching cases and controls based on their ancestry background.
cmplot
📊 Circular and Rectangular Manhattan Plot
coding-interview-university
A complete computer science study plan to become a software engineer.
csvtk
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
dbsnp
dbSNP
deepathology
Tissue and Cancer Type Identification using Deep Neural Networks
gnomad_methods
Hail helper functions for the gnomAD project and Translational Genomics Group
harmony2019
Reproduce analyses in Harmony Manuscript
introme
Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation
linux_codes
locperm
loftee
meta_mirna_snp
mgrb-manuscript
Analyses supporting the Medical Genome Reference Bank manuscript
milad-bastami.github.io
My Research Portfolio on GitHub
mirna_snp
Codes for microRNA polymorphism project
project-based-learning
Curated list of project-based tutorials
proteomeriver_rmarkdown
The Rmarkdown version of proteome river
r_docker_intro
This is a tutorial that is meant to introduce the concept of Docker to new users.
rapids-single-cell-examples
Examples of single-cell genomic analysis accelerated with RAPIDS
reproducible-computational-workflows
A Practical Introduction to Reproducible Computational Workflows (ISMB/ECCB 2019 Tutorial AM4)
rgcookbook
R Graphics Cookbook
rock
:guitar: Rocking R at UMCCR
sarcoma_rvas
sfari_hail
sisg_2021
staarpipeline
An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline
staarpipeline-tutorial
The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
