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Sansan Li's Projects

brocc icon brocc

Consensus taxonomy assignment for short reads (great for fungi)

dose icon dose

:mask: Disease Ontology Semantic and Enrichment analysis

make_silva_db icon make_silva_db

General procedure for making QIIME 2 compatible SILVA reference files

picante icon picante

R tools for integrating phylogenies and ecology

presto icon presto

Fast Wilcoxon and auROC corrected for same logFC as seurat

rgi icon rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

spata2 icon spata2

A Toolbox for Spatial Gene Expression Analysis

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