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caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

cbm

computational and brain/behavior modeling

cnmf_e

Constrained Nonnegative Matrix Factorization for microEndoscopic data

covid19pt-data

😷️🇵🇹 Dados relativos à pandemia COVID-19 em Portugal

cr-thesis-pandoc-template

PhD thesis template for PhDs at Champalimaud Research Programme

deepgraphpose

DeepGraphPose

deeplabcut

Markerless tracking of user-defined features with deep learning

g-node-portal

G-Node portal repository (for the moment only docs)

gui

Software for electrophysiology data acquisition

in-60-seconds

GitPitch In 60 Seconds - A Very Short Tutorial

jez.github.io

A collection of my projects, contact info, and life.

mt7610u

mt7610u_wifi_sta_v3002_dpo_20130916

Modified usb wifi driver for TP_link TL-WDN5200

networkx

Official NetworkX source code repository.

nipy-artwork

Fliers, images, etc

nvim-markdown-preview

Markdown preview for neovim using pandoc and live-server

ohmyzsh

🙃 A delightful community-driven (with 2,000+ contributors) framework for managing your zsh configuration. Includes 300+ optional plugins (rails, git, macOS, hub, docker, homebrew, node, php, python, etc), 140+ themes to spice up your morning, and an auto-update tool so that makes it easy to keep up with the latest updates from the community.

options

pandoc-latex-template

A pandoc LaTeX template to convert markdown files to PDF or LaTeX.

pandoc-lecture

This project defines a skeleton repo for creating lecture slides and handouts including lecture notes out of Pandoc Markdown (http://pandoc.org/MANUAL.html) using a single source approach.

pandoc-starter

📄My pandoc markdown templates and makefiles

python-diskcache

Python disk-backed cache (Django-compatible). Faster than Redis and Memcached. Pure-Python.

python-neo

Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats

python-patterns

A collection of design patterns implemented (by other people) in python

rlexercises

sggc-registration

A Python implementation of HajiRassouliha et al SGGC based subpixel image registration algorithm

tasksched

An opinionated Taskwarrior web UI. Great for scheduling when to do your tasks.

vim-orgmode

Text outlining and task management for Vim based on Emacs' Org-Mode

winget-pkgs

The Microsoft community Windows Package Manager manifest repository