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Stijn van Dongen's Projects

apparix icon apparix

Command line directory bookmarks with jumping to bookmarks, subdirectory tab completion, distant listing etc

bash-utils icon bash-utils

Unix terminal histograms and bar charts (hissyfit). Small data/file munge, morph, find and count scripts/functions in various languages, mostly bash and perl. For apparix see the apparix repository that is a sibling to this one.

mcl icon mcl

MCL, the Markov Cluster algorithm, also known as Markov Clustering, is a method and program for clustering weighted or simple networks, a.k.a. graphs.

nextflow-idioms icon nextflow-idioms

Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.

patterns icon patterns

Drawings / tilings / patterns generally written in PostScript

pick icon pick

Unix table column and row manipulation using column names

sylamer icon sylamer

Fast assessment of microRNA binding and siRNA off-target effects from expression data

zoem icon zoem

A macro/programming language with stacks

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