Name: Stijn van Dongen
Type: User
Company: Bits Bytes and Bases
Bio: MCL clustering, Nextflow, C, Perl, R, bash, PostScript, Python et cetera. Network analysis, bioinformatics, algorithms, discrete mathematics.
Location: Cambridge
Blog: https://micans.org/
Stijn van Dongen's Projects
Command line directory bookmarks with jumping to bookmarks, subdirectory tab completion, distant listing etc
Unix terminal histograms and bar charts (hissyfit). Small data/file munge, morph, find and count scripts/functions in various languages, mostly bash and perl. For apparix see the apparix repository that is a sibling to this one.
Another blooming C utility library
MCL, the Markov Cluster algorithm, also known as Markov Clustering, is a method and program for clustering weighted or simple networks, a.k.a. graphs.
Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.
Drawings / tilings / patterns generally written in PostScript
Unix table column and row manipulation using column names
Fast assessment of microRNA binding and siRNA off-target effects from expression data
A macro/programming language with stacks