Name: Michael Hucka
Type: User
Company: California Institute of Technology
Bio: Research + software + standards for scientific applications, data exchange, and data preservation. Ph.D. in computer science. 🇨🇿🇨🇦🇺🇸
Location: Pasadena, California, USA
Blog: https://www.cds.caltech.edu/~mhucka/
Michael Hucka's Projects
A jQuery plugin for auto-resized, full-screen background images
Build interactive, publication-quality documents from Jupyter Notebooks
LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.
MediaWiki plug-in for accessing values in a Google Spreadsheet
Annotated bibliography on the topic of why we need to improve the preservation of scientific data.
Scripts and programs to work with OmniFocus
Scripts and other things for working with OmniOutliner
Manipulate text and metadata in OmniOutliner documents
A system for creating an online notebook written using Pandoc-flavored Markdown and hosted using GitHub Pages.
Data Analysis and Visualization with Python for Social Scientists
Write interactive web app in script way.
Example README file demonstrating a suggested README file structure for software projects
Repository of research
A shell script for mirroring a Mac OS X directory to a remote computer using rsync over ssh.
Official project repository for the Setuptools build system
shiv is a command line utility for building fully self contained Python zipapps as outlined in PEP 441, but with all their dependencies included.
Collection of personal short scripts for various purposes.
A concise and comprehensive list of computer languages used by humans.
A concise and comprehensive list of known software licenses.
Compute and compare MinHash signatures for DNA data sets.
Data Organization in Spreadsheets for Ecologists
2019 Scientific Software Registry Collaboration Workshop
Taupe takes a downloaded Twitter archive ZIP file, extracts the URLs corresponding to tweets, retweets, replies, quote tweets, and liked tweets, and outputs the results in a comma-separated values (CSV) format that you can use with other software tools.
My own template repository
My starter templates for various things
My TeX & LaTeX styles and other files