Comments (2)
Hello @JLUVicent,
Thank you for raising this question. GraphBin only considers the graph topology for label propagation and the weight between two contigs is not considered. I believe the weight will definitely improve the final binning result.
Currently, there is no script to generate the weights between contigs. However, my latest binning tool MetaCoAG based on assembly graphs considers the weight between pairs of contigs. You can take a look at it.
Hope this helps. Let me know if you have any questions.
Thank you!
Best regards,
Vijini
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I am very glad to receive your reply. Thank you!
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