melissayan Goto Github PK

aaenote_and_ciio

Adverse Event NOte TErminology (AAENOTE) & Catheter Infection Indications Ontology (CIIO)

antibiotic-dictionary

brat

brat rapid annotation tool (brat) - for all your textual annotation needs

brat-docker

containerised brat (http://brat.nlplab.org/)

brat-package

clinicalbert

repository for Publicly Available Clinical BERT Embeddings

clinicalbert-1

ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)

clinicalbert-deep-learning--predicting-hospital-readmission-using-transformer

Blog post on Medium

course-nlp

A Code-First Introduction to NLP course

demo-repo

Demonstration repository

discvrseq

A collection of tools for working with sequencing data

fastbook

The fastai book, published as Jupyter Notebooks

gatk-protected

GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

hotnet2-java

jupyter-brat-proxy

jupyter-example-proxy

ohsu-dissertation-template

A template for writing your dissertation in LaTeX, designed to the specifications outlined by the OHSU School of Medicine.

ospb

patient-context-vectors

Scripts to generate vector representation of free-text notes and ICD codes from the MIMIC3 dataset

radventure.github.io

shockalert-documented

Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU

test

thesis-ntnu

An NTNU thesis LaTeX document class for bachelor, master, and PhD theses

travis_ci_test

vnowchi

A Copy Number Variant Calling Pipeline