Comments (2)
Versions used:
(.venvPyfaidx) [ldelisle@helvetios X]$ python --version
Python 3.7.7
(.venvPyfaidx) [ldelisle@helvetios X]$ pip list | grep pyfaidx
pyfaidx 0.6.2
Also obtained with python 3.9.7. A minimal test to see it is in the PR #180
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Fixed in #180
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Related Issues (20)
- How to specify how the consensus sequence should be built? HOT 2
- Header longer than actual fasta header HOT 2
- Incomplete index HOT 3
- Feature request: get sequence length HOT 2
- fool proof faidx .bed file documentation HOT 1
- Transition from Travis-CI to GH actions HOT 1
- python3.8 pip install with --user, on mac, doesn't install faidx script HOT 4
- Using a pathlib.Path object as filename HOT 5
- Migration to pyproject.toml? HOT 7
- Version in APT doesn't have correct dependenceis HOT 2
- BED parsing not fully compliant with spec
- Allow supplying no .bed file and creating just the index HOT 2
- missing setuptools dependency in 0.7.2 HOT 2
- 27 tests fail on `=pyfaidx-0.7.2.1` HOT 1
- FastaVariant for checking the reference genome for the VCF file HOT 1
- Incorrect results when used in parallel HOT 12
- DeprecationWarning: pkg_resources HOT 2
- Insert indels using mutable option HOT 2
- getting UnicodeDecodeError when running faidx with a bed file input HOT 8
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