mdondrup Goto Github PK

admixture_simulation

admixture_workflow

alphafold

Open source code for AlphaFold.

bioperl-ext

blastviewer

chado

the GMOD database schema

combisv

Combine structural variation outputs from long sequencing reads into a superior call set

cv2cck

A Drupal module that allows to use chado controlled vocabularies as CCK fields

cvautocomplete

Try to develop an autocompletion modul for CV chado entries.

dm-haiku

JAX-based neural network library

drupal627

drupalrolesadd

ena-tool

A simple command-line tool to create and manage ENA projects.

gbrowse

the Generic Genome Browser

gendb_lite

A simplistic no-frills module for genomics data

ld2hdf5

convert hapmap format ldfiles to hdf5 in java

licevault

code related to LiceVault

lrsday

LRSDAY: Long-read Sequencing Data Analysis for Yeasts

makeld

mfannot

MFannot is a program for the annotation of mitochondrial and plastid genomes

minidbg

Example solution for the De Bruijn Graph assembly problem

molscript

The MolScript program produces publication-quality images of macromolecular 3D structures.

openmm_rocm_pre-built-for-singularity

OpenMM is a toolkit for molecular simulation using high performance GPU code.

porechop

adapter trimmer for Oxford Nanopore reads

r-code-snippets

My R code snippets

reannotate_longqueryname

A slightly modified version of the program REannotate (http://www.bioinformatics.org/reannotate/) to support for longer query names.

rnafinder

rocminstaller

cloned for alphafold install on LUMI-G: ROCm Install Utilities: rocminstall.py script to install a specific ROCm release version/revision.

shufflegff

simplesamlphp

SimpleSAMLphp is an award-winning application written in native PHP that deals with authentication.