mcellteam Goto Github PK
Name: MCell Team
Type: Organization
Blog: http://mcell.org
MCell Team's Projects
add_icos_addon
A simple addon used as a Blender python scripting tutorial
article_mcell4_1
This repository contains data and models for the MCell4 article
bionetgen
Rule-based modeling framework
browser_plot
A web-based plotting tool for CellBlender
bundle_cellblender
A set of scripts to create bundled versions of CellBlender (with Blender, MCell, BNG, etc)
cellblender
Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models
cellblender_models
Repository for CellBlender Models and Examples
cellblender_tutorials
CellBlender Tutorials
gamer
Geometry-preserving Adaptive Mesher
gamer-v1
Geometry-preserving Adaptive Mesh Generator
gamer1
Geometry-preserving Adaptive MeshER Version 1
libbng
BioNetGen library
libmcellpp
C++ Version of MCell
mcell
MCell Monte Carlo Simulator of Cellular Microphysiology
mcell_galaxy
Project to create an MCell tool that works within Galaxy
mcell_qrg
The MCell Quick Reference Guide
mcell_tests
New tests for MCell4
mcell_tools
Package build repository
mcell_vagrantfiles
A set of Vagrantfiles to quickly spin up VMs for MCell/CellBlender testing and development
mcell_web
Provides a simple web interface for running MCell
mcellrules
Rule Based Modeling using MCell, NFsim, and bionetgen
mesh_tools
A collection of tools for processing and analyzing surface meshes for use with MCell/CellBlender
neuron_launcher
Set of tools in Blender to create models for MCell/Neuron hybrid simulations
neuropil_tools
Blender addon to automate annotation and analysis of dendritic spines and axons in neuropil. Requires installation of CellBlender.
nfsim
A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
nfsimcinterface
A C interface for the NFSim API
nutmeg
nutmeg is a concurrent regression test framework for the MCell simulator
py_mdl_parser
Pure python regex mdl parser
swc_mesher
Creates a Blender Object from an SWC formatted file
swift-ir
SWiFT-IR: Signal Whitening Fourier Transform Image Registration
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