Comments (1)
top level input directory of clustering run now should contain "almitey.html" which will have some summary statistics and a link for each cluster containing inferred boundaries.
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Related Issues (10)
- Threshold the sequence logos for extracting consensus sequences from boundary
- Add contig length to almitey output, can be used in concert with number of boundaries
- error when logfile is not explicitly defined in Almitey class
- logfile default in Almitey dos not work HOT 1
- in create_seqlogo_dataframe seqlen = len(sequences[0]) IndexError: list index out of range HOT 1
- pytz is included as dependencies bu never used
- remove pip dependencies
- make almitey a module HOT 2
- Use all read information for computing sequence logos
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