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Maxim Lippeveld's Projects

buzz icon buzz

Interactive visualization tool for exploring low-dimensional data embeddings.

cellpose icon cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

cellprofiler icon cellprofiler

An open-source application for biological image analysis

dambi-hpc-guide icon dambi-hpc-guide

Basic and Advanced usage of High-Performance Computing in Bioinformatics

datasets icon datasets

TFDS is a collection of datasets ready to use with TensorFlow, Jax, ...

dec-da icon dec-da

Deep Embedded Clustering with Data Augmentation (DEC-DA). Performance on MNIST (acc=0.985, nmi=0.960).

deep-learning-biology icon deep-learning-biology

This repository contains the notebooks for the exercise sessions of the VIB Deep Learning for Biology workshop

deepclustering icon deepclustering

Codebase for developing and testing deep clustering methods, specifically for imaging flow cytometry data.

django-image-cropping icon django-image-cropping

Django helper application to easily and non-destructively crop arbitrarily large images in admin and frontend.

features icon features

A collection of Dev Container Features managed by Dev Container spec maintainers. See https://github.com/devcontainers/feature-starter to publish your own

ifcimglib icon ifcimglib

This is a package for working with imaging cytometry data.

napari icon napari

napari: a fast, interactive, multi-dimensional image viewer for python

neuralnets icon neuralnets

This code implements various useful utilities for training neural networks.

rdm-ls icon rdm-ls

Session for Research Data Management in Life Sciences workshop on 10 Nov 2020. Creating and working with a reproducible data analysis environment.

riverreliability icon riverreliability

Repository for the riverreliability python package. This package provides the riverreliability diagram and PEACE metric, as well as the confidence-reliability diagram and ECE metric.

seaborn icon seaborn

Statistical data visualization using matplotlib

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