maweigert Goto Github PK

01_intro_mldl

Intro exercise for ML and DL...

alpao_calibration

backbones

Common neural network architectures implemented in PyTorch

betterplots

Some utilities to create better plots with seaborn

biobeam

GPU accelerated beam propagation tools for biological light tissue simulations

bpm

Opencl accelerated beam propagation in python

cdtriang

clearcontrol-lightsheet

csbdeep

Image restoration for fluorescence microscopy

dl-teaching-resources

Collection of teaching material for deep learning for (biomedical) image analysis

dncnn-tensorflow

:octocat::octocat:A tensorflow implement of the paper "Beyond a Gaussian Denoiser: Residual Learning of Deep CNN for Image Denoising"

edt

Euclidean Distance Transform

embo_2022

CARE/Stardist tutorials for EMBO Practical Course — Computational optical biology 2022

fireflyfestival

gputools

GPU accelerated image/volume processing in Python

imagej.github.io

GitHub Pages for ImageJ

imglib2-algorithm-gpl

Image processing algorithms for ImgLib2 (GPL-licensed)

imreg_dft

Image registration using discrete Fourier transform.

isonet

Isotropic reconstruction of 3D fluorescence microscopy images using convolutional neural networks

keras

Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano or TensorFlow.

magicgui

build GUIs from python functions, using magic.

matplotlib-scalebar

Provides a new artist for matplotlib to display a scale bar, aka micron bar.

maweigert.github.io

multiview-simulation

Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise

napari

napari: a fast, interactive, multi-dimensional image viewer for python

napari-example-plugin-foofoo

napari-foobar

napari-nlm

napari-particles

napari-points-io