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advent_of_code_2022

aoc_23

Advent of Code 2023

appythonment

US state apportionment calculator in Python

automated-interpretation-pipeline

Rare Disease variant prioritisation MVP

awesome

😎 Awesome lists about all kinds of interesting topics

bed_file_fiddling

A script or two to manipulate BED files, changing colour and adding annotations

cheat.sh

the only cheat sheet you need

create_new_captures

ddg2p_pure

A program to interpret genetic duplications with reference to a set of array probes to identify likely frameshifts

djangopractice

Repo for practising Django web/app development

fantasy

analysis for fantasy NFL results

fastqsimulator

A program for taking reference sequences and creating fake fastq reads

fileshifter

final-referencer

This directory represents the final delivered program, concluding development of the Reference Sequencer used at WMRGL

gatk-sv

A structural variation pipeline for short-read sequencing

image_tweaker

lirical

LIkelihood Ratio Interpretation of Clinical AbnormaLities

madness

Django-isation of refseq program, uses conda package refseq

page_clean

page_mpo

Work at the Sanger Institute within the PAGE group, aimed at using mouse phenotype ontology experimental data to identify homologous human gene which may be linked with pre-/neo-natally lethal genes

reference_sequencer

A Python application which takes a GenBank or LRG file as input, and produces a reference sequence alignment for use in sequence checking. This work was completed for the Birmingham Women's NHS Foundation Trust, West Midlands Regional Genetics Laboratory

refparse

Docker-make-python nightmare for translating genomic reference sequences into typeset PDF

slivar

variant expressions, annotation, and filtering for great good.

xml_parser

...Its an xml parser