marta-vidalgarcia Goto Github PK
Name: Marta Vidal-Garcia
Type: User
Company: University of Calgary
Bio: 3D geometric morphometrics | morphological evolution | locomotion | vertebrate anatomy | developmental biology
Location: Calgary, Alberta
Name: Marta Vidal-Garcia
Type: User
Company: University of Calgary
Bio: 3D geometric morphometrics | morphological evolution | locomotion | vertebrate anatomy | developmental biology
Location: Calgary, Alberta
notes and documents for 2019 Workshop
Files related to 2019 workshop
Miscellaneous scripts to deal with 3D landmark data and rendered volumes
A curated list of awesome R frameworks, packages and software.
A short exercise to clone this repo and modify the file locally
3-day workshop to teach biologists how to train and process deep convolutional neural networks for image segmentation through a comprehensive image analysis pipeline for immune profiling of 2D multiplexed images
Drishti
phylogenetic networks using ggplot2 and ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
This repository contains the R code for the paper: Hudson CM, Vidal-García M, Murray TG, Shine R. 2020 The accelerating anuran: evolution of locomotor performance in cane toads ( Rhinella marina, Bufonidae) at an invasion front. Proc. R. Soc. B 20201964. http://dx.doi.org/10.1098/rspb.2020.1964
Repository for registration-based landmarking and shape optimization.
This repository contains the R code, data, and figures for the paper Vidal-García, M., O'Hanlon, J.C., Svenson, G.J, Umbers, K.D.L. (in press) The evolution of defensive displays in praying mantises. Proceedings of the Royal Society B
An R tool for batch-processing of meshes and landmark files for shape analyses
A set of functions to help with geometric morphometric analyses of 3D data
Retrodeformation code for the paper Bolet, A., Stanley, E., Daza, J.D., Arias, J.S., Čerňanský, A., Vidal-García, M., Bauer, A.M., Bevitt, J.J., Peretti, A., Evans, S.E., (2021) Unusual morphology in the mid-Cretaceous lizard Oculudentavis. Current Biology. https://bit.ly/3eaZcVL
Phylogenetic analysis in R
Master the essential skills needed to recognize and solve complex real-world problems with Machine Learning and Deep Learning by leveraging the highly popular Python Machine Learning Eco-system.
python notebooks and example data for bioinformatics-bash-python course run for RSB at ANU
Data Carpentry: Introduction to Geospatial Raster and Vector Data with R
Jenny Bryan's instruction at RaukR: Advanced R for Bioinformatics Summer School
an R tool for standardised rigid rotations of articulated Three-Dimensional structures with application for geometric morphometrics
This R Tool Detects Object Symmetry And Plots Estimated Paired Landmarks
phylogenetic networks using ggplot2 and ggtree
Here's a bash script that'll get Rstudio server (preview 1.3) setup with Microsoft open R 3.5 under the hood.
A MATLAB package for multi-modal voxel-wise brain image analysis
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.