marta-seq Goto Github PK

bumblebee_git

clam

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

enzymeclassification

Recurrent deep neural networks for enzyme functional classification

ilearn

iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, Feature Normalization, Dimension Reduction and Model Construction for Classification, Best Model Selection, Ensemble Learning and Result Visualization for DNA, RNA and Protein Sequences.

lightgbm

A fast, distributed, high performance gradient boosting (GBT, GBDT, GBRT, GBM or MART) framework based on decision tree algorithms, used for ranking, classification and many other machine learning tasks.

penguin

Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry

peptidereactor

A tool for an in-depth comparison and benchmarking of peptide encodings.

propythia

workshop_ml_protein