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  • šŸ‘‹ Hi, Iā€™m @mansikath
  • šŸ‘€ I am interested in utilizing Python for various applications in bioinformatics.
  • šŸŒ± I'm currently learning Python programming and the basics of Linux.

mansikath's Projects

dnasequencetranslator icon dnasequencetranslator

This repository empowers you to perform operations such as generating complementary sequences, translating DNA to RNA, and identifying open reading frames (ORFs) with ease. Whether you're a bioinformatician, geneticist, or enthusiast, this tool simplifies complex genetic code tasks, making it a valuable resource for genomic research and analysis.

fasta-to-genbank-converter icon fasta-to-genbank-converter

A simple Python script using Biopython to convert FASTA files to GenBank format. The script prompts the user for input and output filenames, along with the molecule type (default is DNA). Ensure accurate and annotated GenBank files for your biological sequence data.

fastq-to-bam icon fastq-to-bam

This repository streamlines the conversion of raw DNA sequencing data from FASTQ to BAM format, incorporating scripts that not only facilitate BAM conversion but also generate Sequence Alignment Map (SAM) files.

myalignmentissue icon myalignmentissue

gnuplot my_plot.gp gnuplot 5.4 patchlevel 8 Reading delta file filtered.delta Writing plot files my_plot.fplot, my_plot.rplot ERROR: No alignment data to plot line 0: Cannot load input from 'my_plot.gp'

python-hello-world icon python-hello-world

A simple Python 'Hello World' program to introduce beginners to the language and showcase the basic syntax and structure.

whole-genome-sequencing-pipeline icon whole-genome-sequencing-pipeline

A comprehensive workflow for de novo assembly of whole-genome shotgun sequencing data using Velvet, followed by BLAST searches to analyze assembled contigs.

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