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adiporeg

Transcription regulation networks in differentiating adipocytes

adiporeg_chip

Collect, process and quality control Chromatin Immunoprecipitation followed by sequencing (ChIP-Seq) data from differentiating 3T3-L1.

adiporeg_rna

Collect, process and quality control RNA-sequencing (RNA-Seq) data from differentiating 3T3-L1

biocworkshops

:warning: 2018 :warning: Bioconductor Workshops

buildabiocworkshop

Template for building a bioconductor workshop package using github actions

cars

a web application for renting cars

changer

Change R Package Name

chromatin_segmentation_r

Package demo slides, "Chromatin Segmentation Analysis in R"

chromhmm

chromhmmdata

chromhmmData: Chromosome Size, Coordinates and Anchor Files

colocr_app

A shiny app for conducting co-localization analysis.

cregulome

An R package to access, manage and visualize regulome (microRNA/transcription factors)-gene correlations in cancer

cregulomedb

Build the database file for cRegulome package

curatedadipoarray

A Curated Microarrays Dataset of MDI-induced Differentiated Adipocytes (3T3-L1) Under Genetic and Pharmacological Perturbations

curatedadipochip

A Curated ChIP-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

curatedadiporna

A Curated RNA-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

debcam

dynamic_analysis

Dynamic analysis of zinc contribution to the structural stability of HDAC6 protein

fars

Coursera R packages capstone

fastqcr

fastqcr: Quality Control of Sequencing Data

ggbio

Grid and ggplot2 based visualization for biological data

integratingdatabioc

Source code for the Bioconductor workshop "Integrating gene expression and DNA-binding data using R/Bioconductor"

intro_data_r

A gentle introduction to data analysis in R

intro_meta_r

Introduction to meta analysis in R

latex_overleaf

An introduction to the basics of LaTeX using Overleaf

learnr

Interactive Tutorials with R Markdown

mircancerdb

A database for microRNA-gene/protein expression correlation in cancer.

mpra-design-tool

An R script which takes genetic variants and designs probes for massively parallel reporter assays.

msdr

Mastering software development in R capstone

npa

Network Perturbation Amplitude