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analysis_of_microbiome_community_data_in_r

This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/

annotationforge

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/AnnotationForge.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=AnnotationForge.

bamm

A program for multimodel inference on speciation and trait evolution

bayou

bayou-1

bbmv

Trait evolution on phylogenies in macroevolutionary landscapes of any shape

beast_glm

beautiful-visualization-with-r

《R语言数据可视化之美》配套代码

bmr

Evolution of metabolic scaling

coursecomparativemethods

Examples of application of comparative methods in R

coxme

:exclamation: This is a read-only mirror of the CRAN R package repository. coxme — Mixed Effects Cox Models

diversitree

diversitree: comparative phylogenetic analyses of diversification

easycodeml

echarts

A powerful, interactive charting and visualization library for browser

ecoevolinks

Links for Ecology and Evolution

ecospat

Miscellaneous methods and utilities for spatial ecology analysis, written by current and former members and collaborators of the ecospat group of Prof. Antoine Guisan, Department of Ecology and Evolution (DEE) & Institute of Earth Surface Dynamics (IDYST), University of Lausanne, Switzerland.

eecolidar

enmtools

ENMTools R Package

evolviewdocumentation

Documentation for Evolview

fasparser

A package for manipulating sequence data

fasparser-1

A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data

figtree

Automatically exported from code.google.com/p/figtree

fiz_analysis

geo

geomorph

Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-3-dimensions as well as 3D surfaces in the R statistical computing environment. This repository is dedicated to providing stable and beta versions between CRAN uploads

getorganelle

https://github.com/Kinggerm/GetOrganelle/wiki

ggtree-1

:christmas_tree:visualization and annotation of phylogenetic tree with different types of meta-data

ggtree-link

https://github.com/GuangchuangYu/ggtree.git

kinship

mixed-effects Cox models, sparse matrices, and modeling data

kontopoulos_et_al_temperature_normalisation_2017

Paper: