Comments (7)
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Thank you for your consideration, @sdavey!
Just as an FYI, in the past, we've used this method to split out a particular subdirectory into its own repo. Following this, we removed it from the main repo and added it back as a git submodule
.
from coge.
from coge.
from coge.
Thank you very much, @sdavey. This is perfect!
I would recommend adding a README.md to the new repo, with some instructions on how to install the plugin and use in JBrowse. You could also update the JBrowse registry entry for the CoGe plugin.
BTW, I've created a PR to your plugin repo (LyonsLab/CoGe_plugin#1) which addresses some issues with code minifying. Please review and accept changes at your convenience. Thanks!
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Just an FYI, might want to update your documentation here (https://genomevolution.org/wiki/index.php/Install_coge#Deploy_the_Web_Site) to run a git clone --recursive
in order to pull down the CoGe JBrowse Plugin submodule.
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Related Issues (20)
- Improve the CoGeBlast HPS Count table
- Add download dialog for analysis files HOT 1
- CoGeBlast - lastz fails on some fasta files HOT 3
- CoGeBlast has concurrency issue in writing to sqlite database
- Add toolbar to new dotplot
- Add zoom reset to the toolbar
- Improve the canvas render loop. HOT 1
- Dots rendering off of the viewport
- Add toggle for skipping random/unknown chromosomes HOT 1
- Add chromosome sorting
- Add chromosome labels
- Redundant datasets being loaded
- I can'nt upload by jbrowse job HOT 2
- jbrowse developers options HOT 3
- docker HOT 1
- MAFFT button displaying incorrect name
- spaces in iRODS folder names causing failures
- Add option to SynMap to clear cached results/files for admins HOT 1
- Space in file name causing failure for workflow when loading genome.
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