Name: Sibbe Bakker
Type: User
Company: Wageningen University and Research (WUR)
Bio: I am a bioinformatics master student with a keen interest in bio technology and programming. This is my private repo, please see my gitlab page for uni work.
Location: Elst
Hello I am Sibbe Bakker; a student in bioinformatics eager to learn more about the profession and collaborate. My primary language is python 🐍 , shell and 🇷. I am interested in learning more about rust 🦀 and julia. Additionally, more fundamental languages such as lisp 👽 also facinate me.
For more info, please see my website 🌐:.
My utility scripts 💻 can be found here.
abstreet
Transportation planning and traffic simulation software for creating cities friendlier to walking, biking, and public transit
app
coding_practice
A github repo for me to practice my coding work
goatools
Python library to handle Gene Ontology (GO) terms
luke-ebbis
Config files for my GitHub profile.
luke-ebbis.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
parse
Predicts protein regions that are disordered, and which subset of those can undergo phase separation.
parse_v2
Predicts protein regions that are disordered, and which subset of those can undergo phase separation.
parse_v2_fasta
Quickly find sequences predicted to drive protein-mediated physiological phase separation.
psphunter
A Machine Learning Model to Predict Phase Separation Driving Residues
pspire
PSPire is a machine learning model based on integrated residue-level and structure-level features to predict phase-separating proteins. It is written in Python3 and is available as a command line tool. Adapted to be installed using pixi.
r-image-plotter
rlicor
Reads Licor files from 6400 and 6800, detecting version automatically
rosalind-exercises
A repro for my practice of rosalind
rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
script
A list of utility scripts in various languages that can be downloaded and ran simply on linux systems
scry
SPARQL Compatible seRvice laYer
seq2phase
A fork where pixi handels the dependencies
sparql-overlaps
Finding overlaps with a sparql query
stanx_tools
Various tools associated with mapping transposons (originated as part of the Stan-X project)
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
