lucodevro Goto Github PK
Name: Lucas De Vrieze
Type: User
Bio: PhD candidate & Bioinformatician @ Masschelein lab, VIB-KU Leuven Centre for Microbiology
Lucas De Vrieze's Projects
boinctools
A small suite of bash scripts to control operation of my contribution to the BOINC distributed grid supercomputer
breakout
Implementing breakout for a course assignment :)
comparative-genomics-of-gloeobacter-and-theobroma
Identifying orthologs, paralogs and co-orthologs using BBH, phylogenetic tree analysis using ClustalW and conservation assessment using a simplified Valdar metric
dl-introduction
Assignments for the introductory course in Deep Learning & Artificial Neural Networks
fastkris
Fast automated protocol generation for crystallisation screens
large-omics
Playing around with parsing, querying and visualising SNP data (KU Leuven course Management of Large-scale Omics Data [I0U19A])
miningmodellingpaephageacet
Code repository of my MSc of Bioinformatics thesis "An exploratory analysis of the spread and structure of acetyltransferases in Pseudomonas phages"
panstripe
post processing of bacterial pangenome gene presence/absence matrices
regulatory-genomics-rnaseqchipseq
bulk RNAseq of olfactory gene clusters in Drosophila & SMC3-ChIPseq of a neural cell
rice-yield-indonesia
Exploratory analysis of the yield of some Indonesian rice fields
sequentialscanner
A sequential gene scanner for both gene deletions and upregulations, based on flux balance analysis
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