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3dmembranereconstruction

The is a package to reconstruct 3D membrane fluorescent/brightfield microscope images/movies.

assignment1

assignment2

first commit

beam-propagation-method

cmake_gpufit

A camke project using gpufit dll

copytoimageplus

Assuming you have communication between ImageJ and MATLAB via ImageJ-MATLAB, copytoImagePlus allows you to turn a MATLAB array into ImagePlus object.

cs231n.github.io

Public facing notes page

dali

A library containing both highly optimized building blocks and an execution engine for data pre-processing in deep learning applications

ddff-pytorch

Deep Depth from Focus implementation

ddff-toolbox

Toolbox for Deep Depth From Focus

demo

dsmo.course

Data Science and Matrix Optimization course

fairsim

Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy

lsgans

Implementation of Least Squares Generative Adversarial Networks (GAN); can generate stably high quality image with Pytorch

machine-learning-for-image-based-wavefront-sensing

Master thesis: Uliège

microscpsf-matlab

Fast and Accurate 3D PSF Computation for Fluorescence Microscopy

microscpsf-py

Fast and Accurate 3D PSF Computation for Fluorescence Microscopy

ml-pyxis

Tool for reading and writing datasets of tensors in a Lightning Memory-Mapped Database (LMDB). Designed to manage machine learning datasets with fast reading speeds.

msim

Automatically exported from code.google.com/p/msim

multi-sensor-diffusercam

The Multi-Sensor DiffuserCam project explores diffuser-based imaging systems with multiple sensors. This repository contains MATLAB scripts that interface with Zemax OpticStudio (here we are using version 17.5) allowing users to run analyses available in the OpticStudio suite on a lens file of their choice.

newsim

SIMcheck and fairSIM...

opensim

OpenSIM matlab code

psfmodels-py

Python bindings for scalar and vectorial models of the 3D microscope point spread function.

pytorch

Tensors and Dynamic neural networks in Python with strong GPU acceleration

read_metrology_formats

Functions to read metrology surface in common instrument formats

sim4codes

A frequency domain SIM reconstruction algorithm using reduced number of images

sim_datasets

simcheck

SIMcheck: ImageJ tools for assessing Structured Illumination Microscopy (SIM) data quality and reliability

simcheck-fairsim

Integrate the SIM software

teechart-vcl-for-vcl-delphi-cbuilder--applications-samples

Sample programs showing how to use TeeChart VCL for Delphi and C++ Builder