Comments (1)
Hi, wangxiaodong1021! Thank u for the observation.
There indeed is something unclear in README
. But it's suggested that u could read or search some knowledge of survival analysis.
-
Survival data with ties
For survival data, if there are individuals who all occur the event at the same time, then the survival data is calledWith Ties
. In the general case,Breslow
estimation is applied to model survival data that is with ties. If there are more ties in data,Efron
estimation will be a better choice. Don't worry, This may help u a lot! -
Estimating the baseline survival function
When predicting the survival function of a patient viacoxph
model, we must get the baseline survival function. Similarly, since the survival data is with ties, the methods with different preciseness are provided for estimating baseline survival function. As shown in comments of code, the algorithm for estimating baseline survival function is as follows:
(1).wwe
: WWE (data with ties, more precise)
(2).kp
: Kalbfleisch & Prentice Estimator (data without ties)
(3).bsl
: breslow (data with ties, but the negative value may exist)
And This may be a good introduction about it!
Any problems about this repo/package are welcomed!
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Related Issues (17)
- How to test this with a new data set sample? HOT 17
- why `batch` is not appropriate in survival analysis? HOT 2
- Demonstration data error HOT 1
- TFDeepSurv package on medical images ? HOT 1
- Activation functions for hpopt.py
- loss diverges to NaN HOT 1
- The Average loss at step remains unchanged HOT 1
- The NAN value appears when used Bayesian Hyperparameters Optimization
- Why the parameters optimized by Bayesian parameters are not optimal? HOT 1
- Is there any relevant literature? HOT 1
- How to save the model? HOT 2
- Hyper parameter search with real data set - a concern on CI values... HOT 2
- hyptop issues HOT 8
- TypeError: Object of type int32 is not JSON serializable HOT 1
- Cannot restore variables (weights and bias) HOT 2
- gpu support HOT 2
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