Comments (2)
Traceback (most recent call last):
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/bin/sheets2linkml", line 8, in
sys.exit(convert())
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/click/core.py", line 1128, in call
return self.main(*args, **kwargs)
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/click/core.py", line 1053, in main
rv = self.invoke(ctx)
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/click/core.py", line 1395, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/click/core.py", line 754, in invoke
return __callback(*args, **kwargs)
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/schemasheets/schemamaker.py", line 701, in convert
schema = sm.create_schema(list(tsv_files))
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/schemasheets/schemamaker.py", line 213, in create_schema
self.merge_sheet(f, **kwargs)
File "/Users/MAM/Library/Caches/pypoetry/virtualenvs/sheets-and-friends-XU_YBljG-py3.9/lib/python3.9/site-packages/schemasheets/schemamaker.py", line 276, in merge_sheet
raise SchemaSheetRowException(f'Error in line {line_num}, row={row}') from e
schemasheets.schemamaker.SchemaSheetRowException: Error in line 5, row={'class': '', 'slot': '', 'description': 'a test mixin', 'mixin': 'test mixin'}
from schemasheets.
@cmungall kindly reminded me that there's no such thing as a mixin element, only an element with the mixin attribute set to true.
from schemasheets.
Related Issues (20)
- repo missing LICENSE.md
- the converter doesn't work with the gsheet example
- no docker image available
- linkml2sheets reports `slots` isn't implemented
- Provide pre-test for #109
- Export a schemasheet from a schema with no template HOT 2
- change `import pkg_resources` in `generate_populate.py` to `importlib` HOT 2
- audit the names of variable added in branch `exporting-without-tsv-templ` HOT 1
- merge from branch `exporting-without-tsv-templ` requires unit tests
- Support schema-level settings in the metamodel
- test support for schema elements required for a full-schemasheets MIxS model
- string-ify list items before pasting
- Basics description HOT 2
- linkml2schemasheets-template is not guaranteed to produce a row for every slot used by every class
- issues with attributes column HOT 1
- slots are created when using `--use-attributes`
- using `template` to create exact mapping
- Blank permissible values for enumerations HOT 1
- adding option to support attributes together with slots
- attribute and slot usage in one schema HOT 1
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from schemasheets.