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View Code? Open in Web Editor NEWSymmetric DUST for finding low-complexity regions in DNA sequences
Symmetric DUST for finding low-complexity regions in DNA sequences
Sdust produces wrong output for the following sequence:
>TEST_SEQ
AAACCCTACGCACACAAACCTCCCTCACACAANCCCTACGCNCACAAACCTNCCTCACACAAACCCTACGCACACAAACCTCCCTCACACAAACCCTACGCACACAAA
The sequence length is 108bp, but the range is 52 116
.
Having a tagged release with version number will make for a better conda package. Thank you.
Hi there,
I'm trying to compare mdust with sdust. For this purpose I found this program to be useful as I can download sdust as a stand alone copy. However, I'm having trouble understanding the parameter w and t. The default values for each parameters are 64 and 20 respectively, so I'm guessing w is supposed to be a cut-off value.
Is this right? Thank you in advance.
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