Comments (2)
It's a custom file generated from the COG website that maps COG category metadata to the COG category IDs (e.g., D
). It's a simple 3-column table:
COG_category Functional_description Functional_group
D Cell cycle control, cell division, chromosome partitioning Cellular processes and signaling
M Cell wall/membrane/envelope biogenesis Cellular processes and signaling
N Cell motility Cellular processes and signaling
O Post-translational modification, protein turnover, and chaperones Cellular processes and signaling
T Signal transduction mechanisms Cellular processes and signaling
U Intracellular trafficking, secretion, and vesicular transport Cellular processes and signaling
V Defense mechanisms Cellular processes and signaling
W Extracellular structures Cellular processes and signaling
Y Nuclear structure Cellular processes and signaling
Z Cytoskeleton Cellular processes and signaling
A RNA processing and modification Information storage and processing
B Chromatin structure and dynamics Information storage and processing
J Translation, ribosomal structure and biogenesis Information storage and processing
K Transcription Information storage and processing
L Replication, recombination and repair Information storage and processing
C Energy production and conversion Metabolism
E Amino acid transport and metabolism Metabolism
F Nucleotide transport and metabolism Metabolism
G Carbohydrate transport and metabolism Metabolism
H Coenzyme transport and metabolism Metabolism
I Lipid transport and metabolism Metabolism
P Inorganic ion transport and metabolism Metabolism
Q Secondary metabolites biosynthesis, transport, and catabolism Metabolism
R General function prediction only Poorly characterized
S Function unknown Poorly characterized
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Thank you very much @nick-youngblut!
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