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levrex's Projects

deepphenotypinghpo icon deepphenotypinghpo

Facilitating deep phenotyping by automating the screening of case studies & the comparison of patient similarities (through clustering). This can be used to get an understanding of the underlying pathophysiology for a rare genetic disorder.

diagnosisextraction_ml icon diagnosisextraction_ml

Pipeline for building Machine Learning Classifiers for the diagnosis of EHR text-data. We used this pipeline for our study, published here: https://doi.org/10.2196/23930.

ehr-clustering-ra icon ehr-clustering-ra

Cast different EHR (electronic health record) layers to a shared latent space to identify patient subtypes

maui_tf2 icon maui_tf2

Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit (tf2)

muse icon muse

MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states for spatially resolved transcriptomics data.

poodle icon poodle

Projecting Observations On a Deep Learned Embedding

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